HERV-logo

Search Help

yellow-line

Fields:

FieldExplanationValues
fidfull HERV unique identifierinteger number
s_id id of sequence where element was found (from GoldenPath)e.g. ctg14015
s_beg, s_endpositions in s_id sequenceinteger number
chchromosome1-22,X,Y (and N for unknown)
ch_beg, ch_endpositions in chromosomeinteger number
familyfamily (for list of families check bellow)e.g. HERVL,LTR17
oriorientation of element in sequence+/-
nnumber of fragments, from which whole HERV consistsinteger number, usually 1-30
lenlength of elementinteger number
gcgc contentreal number 0 - 1

Families currently in database

yellow-line

Main page
Webmaster
server status and usage Last modified: $Date: 2001/10/09 11:20:33 $ site: herv.img.cas.cz